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Integrated STEM education provides students with authentic experiences that enhance their STEM interest and competence. While teachers play a significant role in facilitating these activities, they often face a variety of challenges. This instrumental case study examines middle school teachers' perspectives on the iBEARS integrated STEM intervention conducted with a university. The study explores the intervention's impact on classroom dynamics, student skill development, and teacher challenges. Data from interviews and focus groups with 13 teachers revealed that iBEARS significantly enhanced student autonomy, critical thinking, and engagement. Teachers reported increased confidence in implementing hands-on activities despite systemic challenges. The study highlights the value of long-term scientific projects in fostering 21st-century skills and suggests areas for further research in integrated STEM education.